9BDH
Crystal structure of HIV-1 MPER scaffold in complex with antibody Fab Ab45.1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-24 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.97741 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 196.959, 196.959, 93.233 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.240 - 3.000 |
R-factor | 0.2698 |
Rwork | 0.269 |
R-free | 0.29040 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.538 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.21rc1_5127) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.050 |
High resolution limit [Å] | 3.000 | 3.000 |
Number of reflections | 41850 | 3894 |
<I/σ(I)> | 5.9 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.5 | 7.5 |
CC(1/2) | 0.973 | 0.308 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 2M Ammonium Sulfate |