Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9BD4

YjfP, Klebsiella pneumoniae serine hydrolase, unbound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2024-03-03
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.954
Spacegroup nameC 1 2 1
Unit cell lengths102.706, 68.195, 65.363
Unit cell angles90.00, 77.16, 90.00
Refinement procedure
Resolution45.110 - 1.300
R-factor0.162
Rwork0.161
R-free0.17480
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.886
Data reduction softwareXDS
Data scaling softwareAimless (0.7.8)
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.1101.320
High resolution limit [Å]1.3001.300
Rmerge0.1242.794
Rmeas0.1393.152
Rpim0.0621.433
Total number of observations51321823779
Number of reflections1069745160
<I/σ(I)>9.61.7
Completeness [%]99.2
Redundancy4.84.6
CC(1/2)0.9980.369
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5291.150.1 M ammonium sulfate, 35% w/v PEG 8,000, sodium acetate pH 5.0

237992

PDB entries from 2025-06-25

PDB statisticsPDBj update infoContact PDBjnumon