9BD4
YjfP, Klebsiella pneumoniae serine hydrolase, unbound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-03-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.954 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 102.706, 68.195, 65.363 |
Unit cell angles | 90.00, 77.16, 90.00 |
Refinement procedure
Resolution | 45.110 - 1.300 |
R-factor | 0.162 |
Rwork | 0.161 |
R-free | 0.17480 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.886 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.8) |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.110 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.124 | 2.794 |
Rmeas | 0.139 | 3.152 |
Rpim | 0.062 | 1.433 |
Total number of observations | 513218 | 23779 |
Number of reflections | 106974 | 5160 |
<I/σ(I)> | 9.6 | 1.7 |
Completeness [%] | 99.2 | |
Redundancy | 4.8 | 4.6 |
CC(1/2) | 0.998 | 0.369 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 291.15 | 0.1 M ammonium sulfate, 35% w/v PEG 8,000, sodium acetate pH 5.0 |