9B4U
Crystal structure of p110alpha-RBD covalently bound to a breaker compound BBO-10203 via Cys242
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 78.041, 71.613, 62.090 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.590 - 2.210 |
R-factor | 0.2309 |
Rwork | 0.229 |
R-free | 0.26920 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.583 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.21_5207: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.590 | 48.590 | 2.340 |
High resolution limit [Å] | 2.210 | 6.560 | 2.210 |
Rmerge | 0.063 | 0.031 | 1.052 |
Rmeas | 0.066 | 0.032 | 1.097 |
Number of reflections | 18081 | 772 | 2822 |
<I/σ(I)> | 23.35 | ||
Completeness [%] | 99.8 | ||
Redundancy | 13.1 | ||
CC(1/2) | 0.999 | 0.998 | 0.928 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.9 | 277 | 0.1 M Tris, 0.2 M CaCl2, 24 % PEG 6000 |