Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9YAF

TCR-HLA-DQ2.5-glia-a1a complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-04-02
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.95373
Spacegroup nameP 21 21 21
Unit cell lengths90.619, 122.666, 252.857
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.590 - 3.250
R-factor0.2236
Rwork0.222
R-free0.25690
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.710
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.5903.360
High resolution limit [Å]3.2503.250
Rmerge0.2921.179
Number of reflections452284365
<I/σ(I)>6.5
Completeness [%]99.9
Redundancy9.2
CC(1/2)0.9710.639
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.2M trisodium citrate, 16-20% PEG3350

259351

PDB entries from 2026-09-09

PDB statisticsPDBj update infoContact PDBjnumon