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9VP8

Crystal structure of YdjB from Salmonella enterica subsp. enterica serovar Typhi

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]125
Detector technologyPIXEL
Collection date2022-09-25
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.000
Spacegroup nameP 43 21 2
Unit cell lengths42.880, 42.880, 140.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.640 - 1.920
R-factor0.1917
Rwork0.191
R-free0.21150
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.764
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.18.2_3874: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.6401.989
High resolution limit [Å]1.9201.920
Number of reflections107251045
<I/σ(I)>50.97
Completeness [%]99.9
Redundancy25.3
CC(1/2)1.0000.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.1520% w/v PEG 8000 0.1M MES pH 6.0 0.2M Ca(Oac)2

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