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9VEW

SIRT2 structure in complex with H3K18myr peptide and native NAD: pre-catalysis state 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2025-04-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97861
Spacegroup nameP 1 21 1
Unit cell lengths37.919, 76.608, 55.707
Unit cell angles90.00, 97.36, 90.00
Refinement procedure
Resolution55.309 - 2.680
Rwork0.182
R-free0.25070
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4x3o
RMSD bond length0.007
RMSD bond angle1.643
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0430 (refmacat 0.4.100))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.3102.810
High resolution limit [Å]2.6802.680
Number of reflections88521158
<I/σ(I)>10.63.4
Completeness [%]98.8
Redundancy6.9
CC(1/2)0.9950.922
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP289Tris 8.0, 25% PEG 2000MME

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PDB entries from 2025-12-03

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