Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9OLY

Crystal structure of E. coli ApaH D37A mutant, apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-2
Synchrotron siteNSLS-II
Beamline17-ID-2
Temperature [K]100
Detector technologyPIXEL
Collection date2023-06-27
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.92010
Spacegroup nameC 1 2 1
Unit cell lengths167.298, 55.540, 120.676
Unit cell angles90.00, 129.63, 90.00
Refinement procedure
Resolution64.430 - 2.230
R-factor0.232
Rwork0.229
R-free0.28100
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.006
Data reduction softwareautoPROC
Data scaling softwareautoPROC
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]92.9482.270
High resolution limit [Å]2.2302.230
Rmerge0.2261.188
Number of reflections416702064
<I/σ(I)>30.8
Completeness [%]99.599.8
Redundancy3.43.3
CC(1/2)0.9760.329
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291Conditions: 0.3 mM ApaH (10 mg/mL), 1 mM DTT, 25 mM Hepes (pH 7.5), 0.2 M NaCl. Well solution: 0.1 M Hepes (pH 7.5), 0.2 M Li2SO4, 25% PEG3350.

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon