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9OFX

Crystal structure of c-Src SH3 domain in H32 space group mediated by nickel

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-2
Synchrotron siteNSLS-II
Beamline17-ID-2
Temperature [K]100
Detector technologyPIXEL
Collection date2024-07-23
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979315
Spacegroup nameH 3 2
Unit cell lengths63.770, 63.770, 271.710
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution31.890 - 1.450
R-factor0.1642
Rwork0.163
R-free0.19610
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.879
Data reduction softwareXDS
Data scaling softwareAimless (0.7.15)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX ((1.21.1_5286: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.9501.480
High resolution limit [Å]1.4501.450
Rmerge0.0863.467
Rmeas0.0873.505
Rpim0.0120.509
Total number of observations90146
Number of reflections730361925
<I/σ(I)>22.91.8
Completeness [%]100.0
Redundancy52.646.8
CC(1/2)1.0000.784
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52931.7 M Ammonium Sulfate, 5 mM NiCl2, 10% glycerol, 0.1 M HEPES pH 7.5

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