9NQT
[3,5,11-2] Shifted DNA assembly with an aspect ratio of (3,5,11) base pairs and 2 nt sticky ends
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-16 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.00001 |
Spacegroup name | P 32 |
Unit cell lengths | 68.521, 68.521, 59.634 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.260 - 6.090 |
R-factor | 0.1393 |
Rwork | 0.138 |
R-free | 0.15560 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.570 |
Data reduction software | autoPROC |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.341 | 59.341 | 7.432 |
High resolution limit [Å] | 6.090 | 9.393 | 6.090 |
Number of reflections | 612 | 204 | 204 |
<I/σ(I)> | 7 | ||
Completeness [%] | 86.7 | ||
Redundancy | 10.4 | ||
CC(1/2) | 0.996 | 0.996 | 0.105 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM MOPS, 1.25 M magnesium sulfate |