9MUJ
RlmR 23S rRNA methyltransferase from Thermus thermophilus in complex with methylated rRNA (Um2552) and S-adenosyl-L-homocysteine (SAH)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-06-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.978565 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 112.920, 117.110, 58.180 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.311 - 2.006 |
R-factor | 0.2071 |
Rwork | 0.206 |
R-free | 0.23470 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.572 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.11_2563) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.311 | 47.311 | 2.060 |
High resolution limit [Å] | 2.006 | 8.970 | 2.010 |
Rmerge | 0.128 | 0.039 | 2.464 |
Rmeas | 0.133 | 0.040 | 2.558 |
Number of reflections | 52487 | 678 | 3823 |
<I/σ(I)> | 11.92 | ||
Completeness [%] | 100.0 | ||
Redundancy | 13.6 | ||
CC(1/2) | 0.999 | 0.999 | 0.386 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 4.5 | 292 | Na-Citrate 0.1M, pH4.5, PEG6000 10%, LiCl 1M |