9LQI

Structure of Nanobody-161 in complex of Tumor necrosis factor receptor 2 (TNFR2)

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SSRF BEAMLINE BL02U1
Synchrotron site	SSRF
Beamline	BL02U1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2022-08-23
Detector	DECTRIS EIGER2 X 9M
Wavelength(s)	0.9792
Spacegroup name	P 21 21 21
Unit cell lengths	63.096, 96.478, 122.704
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	37.660 - 2.950
R-factor	0.2672
Rwork	0.264
R-free	0.29500
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond angle	13.626
Data reduction software	HKL-2000
Data scaling software	HKL-2000
Phasing software	PHENIX
Refinement software	PHENIX ((1.20.1_4487: ???))

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	37.660	3.050
High resolution limit [Å]	2.950	2.950
Number of reflections	14573	14573
<I/σ(I)>	9067
Completeness [%]	88.7
Redundancy	3.6
CC(1/2)	0.992	0.995

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP		289	0.1 M sodium citrate pH 5.5 12.5% w/v PEG 6000