Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9LD5

Crystal structure of LSSmOrange under cryogenic temperature at pH 8.0

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-23
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths39.270, 85.050, 41.710
Unit cell angles90.00, 116.20, 90.00
Refinement procedure
Resolution42.520 - 1.900
R-factor0.1786
Rwork0.177
R-free0.20700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4q7r
RMSD bond length0.006
RMSD bond angle0.968
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((1.19.2_4158: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.5202.020
High resolution limit [Å]1.9001.900
Number of reflections194063256
<I/σ(I)>10.041.14
Completeness [%]99.999.9
Redundancy27.2825.24
CC(1/2)0.9950.645
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE82930.1 M Tris-HCl pH 8.0, 28% (w/v) PEG 3350, 0.6 M NaCl

256789

PDB entries from 2026-07-22

PDB statisticsPDBj update infoContact PDBjnumon