9JMA
Crystal structure of glycosyltransferase AvpGT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-02 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.987 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.362, 95.144, 70.484 |
Unit cell angles | 90.00, 97.16, 90.00 |
Refinement procedure
Resolution | 42.090 - 2.200 |
R-factor | 0.1976 |
Rwork | 0.195 |
R-free | 0.24460 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.910 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.090 | 2.279 |
High resolution limit [Å] | 2.200 | 2.200 |
Number of reflections | 32146 | 3202 |
<I/σ(I)> | 5.07 | 3.01 |
Completeness [%] | 99.7 | |
Redundancy | 6.5 | |
CC(1/2) | 0.955 | 0.823 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 20% (w/v) PEG 6000, 0.1 M Hepes, 0.2 M Calcium chloride dihydrate |