9JJ7
The crystal structure of SARS-CoV-2 NSP5 in complex with eIF4G2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.978 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 97.001, 81.980, 51.649 |
Unit cell angles | 90.00, 114.99, 90.00 |
Refinement procedure
Resolution | 43.960 - 1.800 |
R-factor | 0.1951 |
Rwork | 0.194 |
R-free | 0.21230 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 2.016 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.960 | 1.864 |
High resolution limit [Å] | 1.800 | 1.800 |
Number of reflections | 66581 | 33873 |
<I/σ(I)> | 17.24 | |
Completeness [%] | 99.6 | |
Redundancy | 6.7 | |
CC(1/2) | 0.998 | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 0.1 M MES pH 5.6, 7% PEG 6000, and 6% dimethyl sulfoxide (DMSO) |