Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9HQS

Variant R313K of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the product UMP at 1.1 Angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2022-02-28
DetectorDECTRIS EIGER2 X CdTe 16M
Wavelength(s)0.6888
Spacegroup nameC 2 2 21
Unit cell lengths85.470, 117.400, 60.810
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.550 - 1.100
R-factor0.1276
Rwork0.127
R-free0.13980
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.087
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.5501.139
High resolution limit [Å]1.1001.100
Rmeas0.049
Number of reflections12240211307
<I/σ(I)>22.81
Completeness [%]98.9
Redundancy12.6
CC(1/2)1.0000.866
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293100 mM Tris/HCl pH 7.0, 1.7 - 1.9 M Ammonium sulfate, 10 mM Glutathion pH 8. 0,5% (w/v) Glycerol

257629

PDB entries from 2026-08-05

PDB statisticsPDBj update infoContact PDBjnumon