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9HNE

Cereblon in complex with DDB1, GSPT1 and Compound-1

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, DESY BEAMLINE P11
Synchrotron sitePETRA III, DESY
BeamlineP11
Temperature [K]100
Detector technologyPIXEL
Collection date2024-09-06
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.03321
Spacegroup nameP 1 2 1
Unit cell lengths158.340, 112.380, 177.940
Unit cell angles90.00, 95.25, 90.00
Refinement procedure
Resolution49.490 - 3.900
R-factor0.26245
Rwork0.259
R-free0.33557
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle1.326
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.4904.140
High resolution limit [Å]3.9003.900
Number of reflections550758852
<I/σ(I)>5.061.11
Completeness [%]96.596.8
Redundancy4.44
CC(1/2)0.9780.483
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2920.2 M Sodium citrate, 0.1 M Bis-Tris propane pH 7.5, 20% w/v PEG 3350

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