9GXH
Nanobody bound to TBA G-quadruplex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 1 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-12-12 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.978565 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 36.284, 59.331, 70.625 |
| Unit cell angles | 90.00, 95.79, 90.00 |
Refinement procedure
| Resolution | 45.332 - 1.900 |
| R-factor | 0.1581 |
| Rwork | 0.154 |
| R-free | 0.19850 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.973 |
| Data reduction software | XDS |
| Data scaling software | STARANISO (anisotropy correction) |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 70.260 | 1.460 |
| High resolution limit [Å] | 1.390 | 1.390 |
| Rmerge | 0.138 | 3.649 |
| Rmeas | 0.152 | 4.567 |
| Rpim | 0.061 | 2.682 |
| Total number of observations | 253447 | |
| Number of reflections | 43889 | 1022 |
| <I/σ(I)> | 6.8 | |
| Completeness [%] | 72.7 | |
| Redundancy | 5.8 | 2.4 |
| CC(1/2) | 0.990 | 0.109 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 298 | 0.2 M Sodium chloride, 0.1 M Phosphate/citrate, pH = 4.2, 20 % w/v PEG 8000 cryosoak: same solution with 30% glycerol |






