9DSN
D306A Mutant of M.tuberculosis MenD (SEPHCHC Synthase)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-19 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.953644 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 101.217, 139.257, 181.625 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.750 - 2.300 |
R-factor | 0.1937 |
Rwork | 0.192 |
R-free | 0.22840 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.642 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.750 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.108 | 1.590 |
Rmeas | 0.113 | 1.656 |
Rpim | 0.031 | 0.454 |
Total number of observations | 1544924 | 66776 |
Number of reflections | 114176 | 5318 |
<I/σ(I)> | 15.7 | 1.7 |
Completeness [%] | 99.8 | |
Redundancy | 13.5 | 12.6 |
CC(1/2) | 0.999 | 0.633 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 8% PEG 4k, 16% glycerol, 0.02 M each carboxylic acid, 0.1 MES/imidazole pH 6.5 |