Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9DIP

Crystal structure of H5 hemagglutinin from the influenza virus A/Texas/37/2024 (H5N1) with LSTa

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-1
Synchrotron siteSSRL
BeamlineBL12-1
Temperature [K]100
Detector technologyPIXEL
Collection date2024-07-30
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979
Spacegroup nameP 1 21 1
Unit cell lengths103.539, 74.760, 131.101
Unit cell angles90.00, 96.21, 90.00
Refinement procedure
Resolution31.180 - 2.320
R-factor0.2185
Rwork0.216
R-free0.25780
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.533
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.21rc1_5127: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.3802.360
High resolution limit [Å]2.3202.320
Rmeas0.1502.000
Rpim0.0600.780
Number of reflections855098523
<I/σ(I)>15.7
Completeness [%]99.0
Redundancy6.7
CC(1/2)0.9800.340
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1M Hepes 20% PEG6000

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon