9D0Z
X-ray crystal structure of H157Q variant Thermothelomyces thermophilus polysaccharide monooxygenase 9E
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000046 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 102.410, 122.473, 91.478 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.680 - 1.800 |
R-factor | 0.2125 |
Rwork | 0.211 |
R-free | 0.23630 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.848 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.1_5286) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.740 | 1.840 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.135 | 0.537 |
Rmeas | 0.157 | 0.627 |
Rpim | 0.080 | 0.377 |
Number of reflections | 53154 | 3123 |
<I/σ(I)> | 6 | 2 |
Completeness [%] | 99.5 | 99.7 |
Redundancy | 3.6 | 3.8 |
CC(1/2) | 0.985 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | The crystal was grown by hanging drop in conditions optimized from Hampton Index HT G8 (0.2 M Ammonium acetate, 0.1 M HEPES pH 7.5, 25 % w/v polyethylene glycol 3,350). H157Q Mt PMO9E was first reconstituted with excess copper and buffer exchanged to buffer with 50 mM MOPS and 50 mM HEPES pH 6. 1 ul 30 mg/mL H157Q Mt PMO9E was then mixed with 1 uL with 0.2 M Ammonium acetate, 0.1 M HEPES pH 7.5, and 26 % PEG 3,350 in a hanging drop. Crystals grew within 4 days. The crystal was looped with a 0.1-0.2 mm loop, then cryoprotected for 10 seconds in well solution mixed with cryoprotectants to a final concentration of 8% w/v sucrose, 2% w/v glucose, 8% v/v glycerol, and 8% ethylene glycol |