9C46
Right-left hybrid parallel G-quadruplex from SLC2A1 promoter
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 196 |
Detector technology | PIXEL |
Collection date | 2023-07-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.920105 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 64.137, 31.491, 31.500 |
Unit cell angles | 90.00, 104.31, 90.00 |
Refinement procedure
Resolution | 25.100 - 2.390 |
R-factor | 0.2345 |
Rwork | 0.233 |
R-free | 0.25430 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.668 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHENIX (1.19.2_4158) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.523 | 2.429 |
High resolution limit [Å] | 2.388 | 2.388 |
Rmerge | 0.103 | 1.383 |
Number of reflections | 2469 | 120 |
<I/σ(I)> | 8.4 | |
Completeness [%] | 98.7 | 100 |
Redundancy | 3.3 | 3.4 |
CC(1/2) | 1.000 | 0.541 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 285 | 0.08 M NaCl 0.04 M Na Cacodylate pH 6.0 45% MPD |