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9C14

Structure of the CopC-like domain of YcnJ

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2023-03-19
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.378
Spacegroup nameP 43 21 2
Unit cell lengths35.957, 35.957, 165.762
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.440 - 1.600
R-factor0.2129
Rwork0.211
R-free0.23270
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.898
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.2501.630
High resolution limit [Å]1.6001.600
Rmerge0.858
Rmeas0.87640.355
Rpim0.1778.103
Number of reflections15495746
<I/σ(I)>9.6
Completeness [%]100.0100
Redundancy24.124.6
CC(1/2)0.9970.516
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 M Lithium Sulfate, 39% PEG 8000. Cross-seeding with crystals obtained for YcnI W137F (PDB ID: 8UM6)

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