9C14
Structure of the CopC-like domain of YcnJ
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-D |
| Synchrotron site | APS |
| Beamline | 21-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-03-19 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1.378 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 35.957, 35.957, 165.762 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 41.440 - 1.600 |
| R-factor | 0.2129 |
| Rwork | 0.211 |
| R-free | 0.23270 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.898 |
| Data reduction software | DIALS |
| Data scaling software | DIALS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 55.250 | 1.630 |
| High resolution limit [Å] | 1.600 | 1.600 |
| Rmerge | 0.858 | |
| Rmeas | 0.876 | 40.355 |
| Rpim | 0.177 | 8.103 |
| Number of reflections | 15495 | 746 |
| <I/σ(I)> | 9.6 | |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 24.1 | 24.6 |
| CC(1/2) | 0.997 | 0.516 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Lithium Sulfate, 39% PEG 8000. Cross-seeding with crystals obtained for YcnI W137F (PDB ID: 8UM6) |






