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9BIV

Crystal Structure of Ubc13 with a New Active Site Loop Conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-15
DetectorDECTRIS PILATUS3 R 200K-A
Wavelength(s)1.54178
Spacegroup nameC 1 2 1
Unit cell lengths86.361, 42.942, 93.790
Unit cell angles90.00, 108.37, 90.00
Refinement procedure
Resolution42.684 - 1.680
R-factor0.1454
Rwork0.144
R-free0.17660
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.803
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.16_3546: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.710
High resolution limit [Å]1.6801.680
Rmeas0.286
Number of reflections373651843
<I/σ(I)>5.37
Completeness [%]99.9
Redundancy7.6
CC(1/2)0.9400.940
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE7.5298Ubc13-Mms2 heterodimer was concentrated to 12 mg/mL and stored in 50 mM Tris pH 7.5, 150 mM NaCl, 1mM TCEP. Complex was left to slowly equilibrate from 277K to 298 overnight

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