8ZIG
Crystal structure of the methyltransferase PsiM in complex with s-adenosylmethionine (SAM)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-05-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 58.339, 126.744, 39.559 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.700 - 1.350 |
R-factor | 0.1836 |
Rwork | 0.182 |
R-free | 0.20380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8zie |
RMSD bond length | 0.006 |
RMSD bond angle | 1.020 |
Data reduction software | autoPROC |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 63.370 | 1.430 |
High resolution limit [Å] | 1.350 | 1.350 |
Rmerge | 0.074 | 0.593 |
Rmeas | 0.084 | 0.694 |
Rpim | 0.028 | 0.307 |
Number of reflections | 60331 | 5949 |
<I/σ(I)> | 16.4 | 2.7 |
Completeness [%] | 93.1 | 64.2 |
Redundancy | 8.6 | 4.7 |
CC(1/2) | 0.999 | 0.672 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M Ammonium acetate, 0.1 M Sodium acetate trihydrate pH 4.6, 30% w/v Polyethylene glycol 4,000 |