8ZD3
Crystal structure of ALPK1-N+K in complex with CDP-heptose
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2019-07-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97927 |
Spacegroup name | P 1 |
Unit cell lengths | 62.787, 65.944, 108.679 |
Unit cell angles | 89.62, 107.77, 111.12 |
Refinement procedure
Resolution | 30.550 - 2.300 |
R-factor | 0.2407 |
Rwork | 0.240 |
R-free | 0.26880 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.782 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.550 | 2.386 |
High resolution limit [Å] | 2.300 | 2.303 |
Rmerge | 0.041 | 0.354 |
Number of reflections | 124422 | 9482 |
<I/σ(I)> | 12.99 | |
Completeness [%] | 96.4 | |
Redundancy | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 289 | 8% tacsimate ph 6.0, 14% PEG 3350 |