8Z9K
Crystal structure of LINE-1 ribozyme
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-11-07 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97853 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 93.247, 93.247, 262.655 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 36.670 - 3.860 |
| R-factor | 0.3151 |
| Rwork | 0.314 |
| R-free | 0.34570 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.004 |
| RMSD bond angle | 1.005 |
| Data reduction software | xia2 |
| Data scaling software | xia2 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 80.750 | 4.060 |
| High resolution limit [Å] | 3.860 | 3.860 |
| Number of reflections | 6885 | 863 |
| <I/σ(I)> | 22 | |
| Completeness [%] | 98.2 | |
| Redundancy | 18 | |
| CC(1/2) | 0.999 | 0.976 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.02 M Calcium Chloride dihydrate 0.1 M Sodium Acetate trihydrate pH 4.6 30% v/v 2-Methyl-2,4-pentanediol |






