8Z8W
Crystal Structure of EphA6/Caskin1 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-23 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97891 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 70.434, 70.434, 74.486 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.800 - 3.300 |
R-factor | 0.1991 |
Rwork | 0.196 |
R-free | 0.25680 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.778 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.360 |
High resolution limit [Å] | 3.300 | 8.940 | 3.300 |
Rmerge | 0.118 | 0.036 | 0.916 |
Rmeas | 0.125 | 0.038 | 0.965 |
Rpim | 0.039 | 0.012 | 0.296 |
Total number of observations | 30909 | ||
Number of reflections | 3116 | 196 | 154 |
<I/σ(I)> | 4.1 | ||
Completeness [%] | 99.8 | 100 | 100 |
Redundancy | 9.9 | 8.7 | 10.5 |
CC(1/2) | 0.992 | 0.999 | 0.801 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 289 | 2.2 M Sodium chloride, 0.1 M Tris pH 8.5 |