8YV4
The crystal structure of G.acetivorans RNA kinase Ark1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-09-24 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.987 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.870, 63.297, 70.220 |
Unit cell angles | 90.00, 109.46, 90.00 |
Refinement procedure
Resolution | 26.860 - 1.870 |
R-factor | 0.1929 |
Rwork | 0.191 |
R-free | 0.22040 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.020 |
Data reduction software | HKL-3000 (7.21) |
Data scaling software | HKL-3000 (7.21) |
Phasing software | PHASER (2.7.0) |
Refinement software | PHENIX ((1.19.1_4122: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.790 | 1.970 |
High resolution limit [Å] | 1.870 | 1.870 |
Number of reflections | 35482 | 35482 |
<I/σ(I)> | 11.7 | |
Completeness [%] | 96.2 | |
Redundancy | 5.7 | |
CC(1/2) | 0.992 | 0.539 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 289.15 | 0.1M tri-Sodium citrate pH5.5 20%(w/v) PEG 3000 |