Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8YU6

The structure of thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q), activated by crystal soaking with 1mM CuCl2 and 1 mM sodium ascorbate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17UM
Synchrotron siteSSRF
BeamlineBL17UM
Temperature [K]100
Detector technologyPIXEL
Collection date2023-07-08
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths66.760, 96.300, 148.760
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.850 - 1.550
R-factor0.16588
Rwork0.164
R-free0.19526
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle2.068
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.600
High resolution limit [Å]1.55010.0001.550
Rmerge0.1250.0341.857
Rmeas0.1370.0372.018
Number of reflections13867960312398
<I/σ(I)>13.32
Completeness [%]99.5
Redundancy6.5
CC(1/2)0.9980.9970.503
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2880.1M HEPES, pH 7.5, 20% PEG 8000, 8% Ethylene glycol

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon