8YSH
MERS-CoV RBD in complex with nanobody Nb14
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-28 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 58.488, 58.488, 351.625 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.110 - 1.990 |
R-factor | 0.2293 |
Rwork | 0.229 |
R-free | 0.23920 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.092 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 87.910 | 2.090 |
High resolution limit [Å] | 1.990 | 1.990 |
Number of reflections | 43747 | 4239 |
<I/σ(I)> | 17.5 | |
Completeness [%] | 99.9 | |
Redundancy | 24.9 | |
CC(1/2) | 0.999 | 0.937 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 10% w/v PEG 6000, 8% Ethylene glycol, 0.1 M Citric acid pH 3.5 |