8YM3
Structural basis of Elongation factor Tu in regulating photoinhibition in Synechococcus sp. PCC 7942.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9980 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.897, 86.548, 60.775 |
Unit cell angles | 90.00, 95.74, 90.00 |
Refinement procedure
Resolution | 42.710 - 2.050 |
R-factor | 0.1869 |
Rwork | 0.185 |
R-free | 0.22240 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.458 |
Data reduction software | HKL-3000 (7.21) |
Data scaling software | HKL-3000 (7.21) |
Phasing software | PHASER (2.70) |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.710 | 2.100 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.200 | 1.758 |
Rmeas | 0.403 | 1.919 |
Rpim | 0.160 | 0.756 |
Total number of observations | 17421 | |
Number of reflections | 35495 | 2637 |
<I/σ(I)> | 5 | 2.1 |
Completeness [%] | 100.0 | |
Redundancy | 6.5 | 6.6 |
CC(1/2) | 0.909 | 0.283 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 289 | 0.085 M HEPES sodium pH 7.5, 1.7% v/v Polyethylene glycol 400, 1.7 M Ammonium sulfate, 15% v/v Glycerol |