8YLZ
Structure of a cis-Geranylfarnesyl Diphosphate Synthase from Streptomyces clavuligerus
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL10U2 |
| Synchrotron site | SSRF |
| Beamline | BL10U2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-09-14 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97880 |
| Spacegroup name | P 21 2 21 |
| Unit cell lengths | 42.580, 61.140, 84.340 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.570 - 1.600 |
| R-factor | 0.1969 |
| Rwork | 0.195 |
| R-free | 0.22640 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.917 |
| Data reduction software | iMOSFLM |
| Data scaling software | pointless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 34.940 | 1.630 |
| High resolution limit [Å] | 1.600 | 1.600 |
| Rmerge | 0.045 | 0.127 |
| Rmeas | 0.048 | 0.135 |
| Rpim | 0.015 | 0.044 |
| Total number of observations | 298879 | 12444 |
| Number of reflections | 27160 | 1362 |
| <I/σ(I)> | 33.2 | 11.9 |
| Completeness [%] | 91.3 | |
| Redundancy | 11 | 9.1 |
| CC(1/2) | 0.998 | 0.989 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.7 | 289.15 | 18% (w/v) Polyethylene glycol 4000, 0.1 M MES monohydrate (pH 5.7) |






