8YJC
Structure of Vibrio vulnificus MARTX cysteine protease domain C3727A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-08-04 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 88.060, 69.816, 40.041 |
Unit cell angles | 90.00, 107.69, 90.00 |
Refinement procedure
Resolution | 24.730 - 1.300 |
R-factor | 0.1706 |
Rwork | 0.170 |
R-free | 0.18920 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.958 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.052 | 0.263 |
Number of reflections | 54914 | 2163 |
<I/σ(I)> | 46.8 | 7.5 |
Completeness [%] | 97.1 | 76.4 |
Redundancy | 4.9 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 298 | 0.1 M HEPES pH 9.0, 30% PEG 8000 |