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8YJ6

Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B2
Synchrotron siteSPring-8
BeamlineBL26B2
Temperature [K]100
Detector technologyCCD
Collection date2021-11-01
DetectorRAYONIX MX225-HS
Wavelength(s)1.2820
Spacegroup nameP 21 21 21
Unit cell lengths39.935, 49.828, 147.398
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.550 - 1.370
R-factor0.1711
Rwork0.170
R-free0.19370
Structure solution methodSAD
RMSD bond length0.005
RMSD bond angle0.821
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareCRANK2
Refinement softwarePHENIX (1.17_3644+SVN)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.5501.420
High resolution limit [Å]1.3701.370
Rmerge0.0740.823
Rpim0.0210.343
Number of reflections54591592
<I/σ(I)>211.6
Completeness [%]87.4
Redundancy12.3
CC(1/2)0.9990.727
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2930.2 M MgCl2, 0.1 M Tris (pH 8.5), 25% w/v PEG3350

222036

PDB entries from 2024-07-03

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