8YJ5
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL26B2 |
| Synchrotron site | SPring-8 |
| Beamline | BL26B2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2021-11-01 |
| Detector | RAYONIX MX225-HS |
| Wavelength(s) | 1.0 |
| Spacegroup name | I 41 |
| Unit cell lengths | 120.450, 120.450, 156.176 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.790 - 3.660 |
| R-factor | 0.2651 |
| Rwork | 0.263 |
| R-free | 0.30330 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3hh8 |
| RMSD bond length | 0.023 |
| RMSD bond angle | 2.037 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.17_3644+SVN) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.790 | 3.790 |
| High resolution limit [Å] | 3.660 | 3.660 |
| Rmerge | 0.177 | 1.891 |
| Rpim | 0.069 | 0.746 |
| Number of reflections | 12349 | 3077 |
| <I/σ(I)> | 7.9 | 1 |
| Completeness [%] | 99.9 | |
| Redundancy | 7.61 | |
| CC(1/2) | 0.996 | 0.452 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 7 | 293 | 1.8 M Ammonium citrate tribasic |






