Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8YFJ

TRIP4 ASCH domain in complex with a 12bp dsDNA (5'-ATTGGATCCAAT-3')

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-06-02
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9785
Spacegroup nameP 61 2 2
Unit cell lengths67.496, 67.496, 198.082
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution37.780 - 1.840
R-factor0.2105
Rwork0.210
R-free0.22790
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.917
Data scaling softwareAimless
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]58.4601.890
High resolution limit [Å]1.8401.840
Rmerge0.0301.118
Rmeas0.3131.146
Rpim0.0520.247
Total number of observations82480335900
Number of reflections242101735
<I/σ(I)>9.33
Completeness [%]100.0
Redundancy34.120.7
CC(1/2)0.9860.538
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP289.152.0 M (NH4)2SO4

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon