8Y9S
Crystal structure of nanobody MY6321 bound to human serum albumin (HSA)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL10U2 |
| Synchrotron site | SSRF |
| Beamline | BL10U2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-01-06 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.979183 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 65.260, 143.900, 93.670 |
| Unit cell angles | 90.00, 100.23, 90.00 |
Refinement procedure
| Resolution | 46.250 - 2.880 |
| R-factor | 0.23313 |
| Rwork | 0.230 |
| R-free | 0.29265 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.545 |
| Data reduction software | XDS (0.7.7) |
| Data scaling software | XDS (0.7.7) |
| Phasing software | PHASER (2.8.3) |
| Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.250 | 2.950 |
| High resolution limit [Å] | 2.880 | 2.880 |
| Rmerge | 0.286 | 2.018 |
| Rmeas | 0.310 | 2.183 |
| Rpim | 0.120 | 0.825 |
| Total number of observations | 19122 | |
| Number of reflections | 38264 | 2819 |
| <I/σ(I)> | 5.5 | 1.1 |
| Completeness [%] | 99.4 | |
| Redundancy | 6.6 | 6.8 |
| CC(1/2) | 0.983 | 0.436 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.15 M DL-Malic acid pH 7.0, 20% w/v Polyethylene glycol 3,350 |






