8Y9R
Crystal structure of Spiral2 microtubule-binding domain from Physcomitrella patens
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-24 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97899 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 59.826, 95.646, 150.018 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.095 - 2.799 |
Rwork | 0.215 |
R-free | 0.27640 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.856 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | CRANK2 |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.110 | 2.830 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.150 | 1.593 |
Rmeas | 0.163 | |
Rpim | 0.063 | 0.673 |
Total number of observations | 161797 | |
Number of reflections | 24426 | 3148 |
<I/σ(I)> | 10 | |
Completeness [%] | 99.6 | |
Redundancy | 6.6 | 6.5 |
CC(1/2) | 0.998 | 0.693 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M sodium citrate (pH 5.0), 0.2 M NaH2SO4, 50 mM guanidine hydrochloride and 1.4 M ammonium sulfate |