8Y1T
CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI GAMBIENSE GLYCEROL KINASE COMPLEX WITH ADP and G3P
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.900000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.563, 121.741, 154.278 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.860 - 2.400 |
R-factor | 0.19518 |
Rwork | 0.192 |
R-free | 0.24982 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6j9v |
RMSD bond length | 0.011 |
RMSD bond angle | 1.565 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.550 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.054 | 0.719 |
Number of reflections | 45369 | 14161 |
<I/σ(I)> | 18.5 | 2 |
Completeness [%] | 99.8 | 99.1 |
Redundancy | 13.6 | 12.2 |
CC(1/2) | 0.999 | 0.842 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 8-18% PEG 400, 0.1M HEPES, 11% 1,6-HEXANEDIOL, PH 7.5 |