8XYV
De novo designed protein 0705-5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-21 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 27.990, 65.110, 106.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.580 - 1.810 |
R-factor | 0.2186 |
Rwork | 0.216 |
R-free | 0.25900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.864 |
Data reduction software | XDS |
Data scaling software | APEX 2 (0.7.7) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 65.110 | 1.860 |
High resolution limit [Å] | 1.810 | 1.810 |
Rmerge | 0.063 | 0.393 |
Rmeas | 0.066 | 0.458 |
Rpim | 0.020 | 0.227 |
Number of reflections | 18251 | 1250 |
<I/σ(I)> | 22 | 3.3 |
Completeness [%] | 98.6 | 91.9 |
Redundancy | 9.5 | |
CC(1/2) | 0.998 | 0.918 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 0.2 M MgCl2, 0.1 M Tris-HCl pH8.5, 23%PEG 2000-MME |