8XNA
Crystal structure of serine hydroxymethyltransferase 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL45XU |
Synchrotron site | SPring-8 |
Beamline | BL45XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-06-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00000 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 160.605, 160.605, 210.404 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.380 - 3.800 |
Rwork | 0.198 |
R-free | 0.26430 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 1.236 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.380 | 4.250 |
High resolution limit [Å] | 3.800 | 3.800 |
Number of reflections | 16314 | 4525 |
<I/σ(I)> | 12.9 | |
Completeness [%] | 99.6 | |
Redundancy | 18.9 | |
CC(1/2) | 0.993 | 0.963 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 0.1 M (NH4) tartrate pH 7.0, 12% PEG3350 |