8XFA
Structure of the siderophore periplasmic binding protein FtsB mutant Y137A from Streptococcus pyogenes with ferrioxamine E bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-23 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 58.817, 61.723, 69.590 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.177 - 1.850 |
Rwork | 0.171 |
R-free | 0.22030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8xeu |
RMSD bond length | 0.005 |
RMSD bond angle | 1.393 |
Data reduction software | XDS (Feb 5, 2021 BUILT=20210323) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.200 | 1.890 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.103 | 0.851 |
Rpim | 0.030 | 0.292 |
Number of reflections | 22069 | 1187 |
<I/σ(I)> | 18.6 | 2.4 |
Completeness [%] | 99.1 | |
Redundancy | 12.6 | |
CC(1/2) | 0.999 | 0.729 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 100 mM KSCN 30% PEG MME-550 |