8XDY
O-methyltransferase from Lycoris longituba M52A variant complexed with Mg, SAH, and 3,4-dihydroxybenzaldehyde
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-20 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.05200 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 49.857, 81.492, 117.872 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.760 - 2.200 |
R-factor | 0.1791 |
Rwork | 0.178 |
R-free | 0.20130 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.617 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.760 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.112 | 0.804 |
Number of reflections | 46990 | 2173 |
<I/σ(I)> | 12.6 | 2.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.4 | 7.7 |
CC(1/2) | 0.998 | 0.842 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 15% (w/v) PEG 8000, 0.2M MgCl2, 0.1M Tris-HCl (pH 8.0) |