8X9E
Crystal structure of CO dehydrogenase mutant with increased affinity for electron mediators in low PEG concentration
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-20 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 112.083, 75.088, 71.140 |
Unit cell angles | 90.00, 111.39, 90.00 |
Refinement procedure
Resolution | 35.220 - 2.500 |
R-factor | 0.1791 |
Rwork | 0.177 |
R-free | 0.22690 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.145 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.099 | 0.032 | 0.474 |
Rmeas | 0.115 | 0.037 | 0.556 |
Rpim | 0.058 | 0.019 | 0.285 |
Total number of observations | 71132 | ||
Number of reflections | 18938 | 988 | 884 |
<I/σ(I)> | 4.3 | ||
Completeness [%] | 99.3 | 99.7 | 92.8 |
Redundancy | 3.8 | 4 | 3.4 |
CC(1/2) | 0.995 | 0.999 | 0.813 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.1 M HEPES/NaOH pH 7.5, 200 mM MgCl2, and 25% (w/v) PEG 3,350. |