8X3W
Crystal structure of DIMT1 from the thermophilic archaeon, Pyrococcus horikoshii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2022-07-11 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.860, 80.170, 84.640 |
Unit cell angles | 90.00, 115.50, 90.00 |
Refinement procedure
Resolution | 76.390 - 2.010 |
R-factor | 0.19718 |
Rwork | 0.195 |
R-free | 0.24559 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.455 |
Data reduction software | MOSFLM (7.4.0) |
Data scaling software | Aimless (0.7.13) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 76.390 | 2.060 |
High resolution limit [Å] | 2.010 | 2.010 |
Rmerge | 0.100 | 0.563 |
Rmeas | 0.112 | 0.639 |
Rpim | 0.051 | 0.299 |
Total number of observations | 225549 | 15354 |
Number of reflections | 47378 | 3435 |
<I/σ(I)> | 10.4 | 2.7 |
Completeness [%] | 99.9 | |
Redundancy | 4.8 | 4.5 |
CC(1/2) | 0.995 | 0.727 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.4 | 293 | 0.2 M Zinc Acetate Dihydrate, 20% (w/v) PEG 3350 |