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8X37

Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL32XU
Synchrotron siteSPring-8
BeamlineBL32XU
Temperature [K]80
Detector technologyPIXEL
Collection date2021-10-01
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.0
Spacegroup nameC 1 2 1
Unit cell lengths98.260, 50.270, 120.250
Unit cell angles90.00, 91.33, 90.00
Refinement procedure
Resolution49.165 - 1.980
Rwork0.221
R-free0.27440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7vpc
RMSD bond length0.006
RMSD bond angle1.471
Data reduction softwareDIALS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.080
High resolution limit [Å]1.9801.980
Rmeas0.1242.650
Number of reflections412206606
<I/σ(I)>8.521.05
Completeness [%]100.0100
Redundancy6.66.8
CC(1/2)0.9930.750
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293PEG3350, DL-Malic acid

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