8X1H
Crystal structure of N-terminal domain of Nucleocapsid protein of SARS-CoV-2
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
| Synchrotron site | RRCAT INDUS-2 |
| Beamline | PX-BL21 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2022-03-01 |
| Detector | MAR CCD 165 mm |
| Wavelength(s) | 0.9778 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 58.945, 92.344, 96.014 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.240 - 2.000 |
| R-factor | 0.2396 |
| Rwork | 0.237 |
| R-free | 0.27780 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.549 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.19.1_4122: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 37.220 | 2.050 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rmerge | 0.043 | 0.478 |
| Rmeas | 0.048 | 0.534 |
| Rpim | 0.021 | 0.234 |
| Total number of observations | 182143 | |
| Number of reflections | 36178 | 2653 |
| <I/σ(I)> | 22.9 | 3.5 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 5 | 5.1 |
| CC(1/2) | 0.999 | 0.886 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | 27 % PEG3350, Bicine buffer pH 9.0 |






