8WZC
NYN domain of human KHNYN complex with RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.97495 |
Spacegroup name | P 41 3 2 |
Unit cell lengths | 111.197, 111.197, 111.197 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.729 - 1.925 |
Rwork | 0.180 |
R-free | 0.20940 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.583 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHELXD |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.950 |
High resolution limit [Å] | 1.920 | 1.920 |
Number of reflections | 18429 | 1243 |
<I/σ(I)> | 53.2875 | |
Completeness [%] | 99.9 | |
Redundancy | 104 | |
CC(1/2) | 0.999 | 0.424 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Tris-HCl, PEG4000, calcium chloride, 1-Propanol |