8WVF
Crystal structure of Lsd18 mutant T189M and S195M
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17B1 |
Synchrotron site | SSRF |
Beamline | BL17B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-03 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.005, 48.116, 135.569 |
Unit cell angles | 90.00, 91.56, 90.00 |
Refinement procedure
Resolution | 20.044 - 3.757 |
R-factor | 0.2365 |
Rwork | 0.232 |
R-free | 0.31910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8UP4 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.565 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.16_3549: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.044 | 3.897 |
High resolution limit [Å] | 3.757 | 3.757 |
Rmerge | 0.268 | 0.389 |
Rmeas | 0.317 | 0.473 |
Rpim | 0.165 | 0.266 |
Number of reflections | 7514 | 689 |
<I/σ(I)> | 3.7 | 2.2 |
Completeness [%] | 88.0 | |
Redundancy | 1 | |
CC(1/2) | 0.870 | 0.805 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 0.2 M Li2SO4, 0.1M Tris, pH 7.5, 30% PEG4000 |