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8WSK

Crystal structure of SARS-Cov-2 main protease, pH=8.5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2020-06-24
DetectorADSC QUANTUM 315r
Wavelength(s)0.97918
Spacegroup nameP 21 21 21
Unit cell lengths68.006, 102.902, 103.468
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.480 - 1.880
R-factor0.223137339505
Rwork0.222
R-free0.25088
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.929
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.4801.990
High resolution limit [Å]1.8801.880
Rmerge0.1270.915
Number of reflections589708382
<I/σ(I)>20.5
Completeness [%]99.4
Redundancy12.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2980.1M Tris-HCl pH8.5,24%PEG4000

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PDB entries from 2024-11-06

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